Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Polr2aP08775 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Polr2aP08775 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Polr2aP08775 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC26.16■■□□□ 1.78
Polr2aP08775 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC26.16■■□□□ 1.78
Polr2aP08775 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Polr2aP08775 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Polr2aP08775 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Polr2aP08775 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
Polr2aP08775 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Polr2aP08775 Serp2-204ENSMUST00000228055 705 ntBASIC26.15■■□□□ 1.78
Polr2aP08775 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Polr2aP08775 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC26.15■■□□□ 1.78
Polr2aP08775 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Polr2aP08775 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Polr2aP08775 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Polr2aP08775 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Polr2aP08775 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Polr2aP08775 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Polr2aP08775 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Polr2aP08775 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC26.1■■□□□ 1.77
Polr2aP08775 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Polr2aP08775 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
Polr2aP08775 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Polr2aP08775 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Polr2aP08775 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Polr2aP08775 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Polr2aP08775 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Polr2aP08775 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Polr2aP08775 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
Polr2aP08775 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Polr2aP08775 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Polr2aP08775 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Polr2aP08775 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC26.06■■□□□ 1.76
Polr2aP08775 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Polr2aP08775 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC26.06■■□□□ 1.76
Polr2aP08775 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC26.06■■□□□ 1.76
Polr2aP08775 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC26.06■■□□□ 1.76
Polr2aP08775 Gm13241-201ENSMUST00000094493 780 ntBASIC26.06■■□□□ 1.76
Polr2aP08775 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.05■■□□□ 1.76
Polr2aP08775 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.05■■□□□ 1.76
Polr2aP08775 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Polr2aP08775 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Polr2aP08775 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Polr2aP08775 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Polr2aP08775 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC26.04■■□□□ 1.76
Polr2aP08775 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Polr2aP08775 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.03■■□□□ 1.76
Polr2aP08775 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Polr2aP08775 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Polr2aP08775 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC26.02■■□□□ 1.76
Polr2aP08775 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
Polr2aP08775 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Polr2aP08775 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC26.02■■□□□ 1.76
Polr2aP08775 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Polr2aP08775 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.76
Polr2aP08775 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Polr2aP08775 Gm7199-201ENSMUST00000118327 1485 ntBASIC26.01■■□□□ 1.75
Polr2aP08775 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Polr2aP08775 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC26.01■■□□□ 1.75
Polr2aP08775 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Polr2aP08775 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Polr2aP08775 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
Polr2aP08775 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC26■■□□□ 1.75
Polr2aP08775 Gm9847-201ENSMUST00000052528 599 ntBASIC26■■□□□ 1.75
Polr2aP08775 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Polr2aP08775 AC164433.2-201ENSMUST00000226346 1701 ntBASIC25.99■■□□□ 1.75
Polr2aP08775 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.99■■□□□ 1.75
Polr2aP08775 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
Polr2aP08775 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Polr2aP08775 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Polr2aP08775 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC25.98■■□□□ 1.75
Polr2aP08775 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC25.98■■□□□ 1.75
Polr2aP08775 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
Polr2aP08775 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Polr2aP08775 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC25.96■■□□□ 1.75
Polr2aP08775 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Polr2aP08775 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC25.96■■□□□ 1.75
Polr2aP08775 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Polr2aP08775 Gm28536-201ENSMUST00000190971 1317 ntBASIC25.95■■□□□ 1.75
Polr2aP08775 Gm7417-201ENSMUST00000192950 473 ntBASIC25.95■■□□□ 1.75
Polr2aP08775 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Polr2aP08775 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC25.95■■□□□ 1.74
Polr2aP08775 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC25.94■■□□□ 1.74
Polr2aP08775 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Polr2aP08775 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Polr2aP08775 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC25.93■■□□□ 1.74
Polr2aP08775 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.93■■□□□ 1.74
Polr2aP08775 Gm22238-201ENSMUST00000175222 88 ntBASIC25.93■■□□□ 1.74
Polr2aP08775 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC25.93■■□□□ 1.74
Polr2aP08775 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC25.93■■□□□ 1.74
Polr2aP08775 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Polr2aP08775 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Polr2aP08775 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Polr2aP08775 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC25.92■■□□□ 1.74
Polr2aP08775 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC25.92■■□□□ 1.74
Polr2aP08775 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Polr2aP08775 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC25.91■■□□□ 1.74
Polr2aP08775 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC25.91■■□□□ 1.74
Polr2aP08775 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC25.91■■□□□ 1.74
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms