Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
P01852 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.13■□□□□ 0.81
P01852 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
P01852 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
P01852 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.12■□□□□ 0.81
P01852 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01852 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P01852 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01852 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.12■□□□□ 0.81
P01852 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
P01852 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.12■□□□□ 0.81
P01852 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
P01852 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.12■□□□□ 0.81
P01852 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
P01852 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.11■□□□□ 0.81
P01852 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.11■□□□□ 0.81
P01852 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
P01852 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.1■□□□□ 0.81
P01852 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.1■□□□□ 0.81
P01852 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01852 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
P01852 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.1■□□□□ 0.81
P01852 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01852 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
P01852 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01852 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01852 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
P01852 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01852 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01852 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01852 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
P01852 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.09■□□□□ 0.81
P01852 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
P01852 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
P01852 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
P01852 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
P01852 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
P01852 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01852 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
P01852 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
P01852 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
P01852 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
P01852 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.07■□□□□ 0.8
P01852 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
P01852 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01852 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
P01852 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01852 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01852 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P01852 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01852 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01852 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01852 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01852 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
P01852 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
P01852 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
P01852 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01852 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01852 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
P01852 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01852 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
P01852 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01852 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01852 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
P01852 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
P01852 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
P01852 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.03■□□□□ 0.8
P01852 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
P01852 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01852 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
P01852 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
P01852 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
P01852 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.01■□□□□ 0.79
P01852 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.01■□□□□ 0.79
P01852 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P01852 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01852 Gm10420-201ENSMUST00000121713 882 ntBASIC20.01■□□□□ 0.79
P01852 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01852 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01852 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
P01852 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
P01852 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms