Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Abcd4O89016 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd4O89016 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.87■□□□□ 0.77
Abcd4O89016 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd4O89016 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd4O89016 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Abcd4O89016 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcd4O89016 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19.86■□□□□ 0.77
Abcd4O89016 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Abcd4O89016 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcd4O89016 Gm5921-201ENSMUST00000075898 882 ntBASIC19.86■□□□□ 0.77
Abcd4O89016 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Abcd4O89016 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Abcd4O89016 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcd4O89016 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Abcd4O89016 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Abcd4O89016 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abcd4O89016 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Abcd4O89016 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.85■□□□□ 0.77
Abcd4O89016 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Abcd4O89016 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcd4O89016 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Abcd4O89016 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcd4O89016 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcd4O89016 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Abcd4O89016 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.83■□□□□ 0.77
Abcd4O89016 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Abcd4O89016 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Abcd4O89016 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
Abcd4O89016 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Abcd4O89016 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcd4O89016 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Abcd4O89016 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd4O89016 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Abcd4O89016 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd4O89016 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd4O89016 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd4O89016 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd4O89016 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Abcd4O89016 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Abcd4O89016 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.81■□□□□ 0.76
Abcd4O89016 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC19.8■□□□□ 0.76
Abcd4O89016 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Abcd4O89016 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Abcd4O89016 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Abcd4O89016 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Abcd4O89016 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Abcd4O89016 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Abcd4O89016 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcd4O89016 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcd4O89016 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Abcd4O89016 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC19.79■□□□□ 0.76
Abcd4O89016 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Abcd4O89016 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abcd4O89016 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Abcd4O89016 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcd4O89016 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcd4O89016 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.78■□□□□ 0.76
Abcd4O89016 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Abcd4O89016 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Abcd4O89016 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Abcd4O89016 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Abcd4O89016 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Abcd4O89016 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Abcd4O89016 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcd4O89016 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Abcd4O89016 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Abcd4O89016 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.76■□□□□ 0.75
Abcd4O89016 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Abcd4O89016 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Abcd4O89016 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcd4O89016 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Abcd4O89016 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcd4O89016 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Abcd4O89016 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Abcd4O89016 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcd4O89016 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcd4O89016 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Abcd4O89016 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Abcd4O89016 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Abcd4O89016 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Abcd4O89016 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Abcd4O89016 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcd4O89016 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Abcd4O89016 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.72■□□□□ 0.75
Abcd4O89016 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcd4O89016 Gm5812-201ENSMUST00000061073 957 ntBASIC19.72■□□□□ 0.75
Abcd4O89016 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Abcd4O89016 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Abcd4O89016 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Abcd4O89016 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms