Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hcn3O88705 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hcn3O88705 Gm4419-202ENSMUST00000226239 1431 ntBASIC21.17■□□□□ 0.98
Hcn3O88705 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hcn3O88705 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hcn3O88705 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hcn3O88705 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Hcn3O88705 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcn3O88705 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcn3O88705 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcn3O88705 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
Hcn3O88705 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcn3O88705 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Hcn3O88705 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.15■□□□□ 0.98
Hcn3O88705 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.14■□□□□ 0.98
Hcn3O88705 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hcn3O88705 Gm8503-201ENSMUST00000118131 455 ntBASIC21.14■□□□□ 0.97
Hcn3O88705 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC21.14■□□□□ 0.97
Hcn3O88705 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Hcn3O88705 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hcn3O88705 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Hcn3O88705 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn3O88705 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn3O88705 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn3O88705 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcn3O88705 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hcn3O88705 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.12■□□□□ 0.97
Hcn3O88705 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Hcn3O88705 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hcn3O88705 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hcn3O88705 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hcn3O88705 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hcn3O88705 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Hcn3O88705 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hcn3O88705 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hcn3O88705 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hcn3O88705 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hcn3O88705 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hcn3O88705 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Hcn3O88705 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hcn3O88705 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hcn3O88705 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.1■□□□□ 0.97
Hcn3O88705 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hcn3O88705 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hcn3O88705 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.1■□□□□ 0.97
Hcn3O88705 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hcn3O88705 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hcn3O88705 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC21.08■□□□□ 0.97
Hcn3O88705 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hcn3O88705 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hcn3O88705 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hcn3O88705 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.08■□□□□ 0.97
Hcn3O88705 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC21.08■□□□□ 0.97
Hcn3O88705 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hcn3O88705 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Hcn3O88705 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.08■□□□□ 0.96
Hcn3O88705 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hcn3O88705 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Hcn3O88705 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Hcn3O88705 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Hcn3O88705 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hcn3O88705 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.06■□□□□ 0.96
Hcn3O88705 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hcn3O88705 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Hcn3O88705 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hcn3O88705 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Hcn3O88705 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.05■□□□□ 0.96
Hcn3O88705 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.05■□□□□ 0.96
Hcn3O88705 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Hcn3O88705 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hcn3O88705 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.05■□□□□ 0.96
Hcn3O88705 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC21.05■□□□□ 0.96
Hcn3O88705 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hcn3O88705 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hcn3O88705 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hcn3O88705 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hcn3O88705 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Hcn3O88705 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hcn3O88705 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.03■□□□□ 0.96
Hcn3O88705 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.03■□□□□ 0.96
Hcn3O88705 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Hcn3O88705 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hcn3O88705 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hcn3O88705 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Hcn3O88705 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hcn3O88705 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hcn3O88705 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Hcn3O88705 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hcn3O88705 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hcn3O88705 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21■□□□□ 0.95
Hcn3O88705 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21■□□□□ 0.95
Hcn3O88705 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Hcn3O88705 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Hcn3O88705 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.99■□□□□ 0.95
Hcn3O88705 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hcn3O88705 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hcn3O88705 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Hcn3O88705 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Hcn3O88705 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.96■□□□□ 0.95
Hcn3O88705 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms