Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC24.49■■□□□ 1.51
IkbkbO88351 AC151971.4-201ENSMUST00000214717 704 ntBASIC24.49■■□□□ 1.51
IkbkbO88351 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
IkbkbO88351 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
IkbkbO88351 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
IkbkbO88351 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
IkbkbO88351 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
IkbkbO88351 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
IkbkbO88351 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
IkbkbO88351 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
IkbkbO88351 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
IkbkbO88351 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC24.47■■□□□ 1.51
IkbkbO88351 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
IkbkbO88351 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
IkbkbO88351 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
IkbkbO88351 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.46■■□□□ 1.51
IkbkbO88351 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
IkbkbO88351 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
IkbkbO88351 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
IkbkbO88351 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
IkbkbO88351 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
IkbkbO88351 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC24.45■■□□□ 1.5
IkbkbO88351 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
IkbkbO88351 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC24.45■■□□□ 1.5
IkbkbO88351 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
IkbkbO88351 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC24.44■■□□□ 1.5
IkbkbO88351 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
IkbkbO88351 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
IkbkbO88351 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
IkbkbO88351 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
IkbkbO88351 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
IkbkbO88351 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC24.43■■□□□ 1.5
IkbkbO88351 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
IkbkbO88351 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC24.43■■□□□ 1.5
IkbkbO88351 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
IkbkbO88351 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
IkbkbO88351 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
IkbkbO88351 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
IkbkbO88351 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
IkbkbO88351 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
IkbkbO88351 Gm14523-201ENSMUST00000117260 558 ntBASIC24.42■■□□□ 1.5
IkbkbO88351 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
IkbkbO88351 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
IkbkbO88351 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
IkbkbO88351 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
IkbkbO88351 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
IkbkbO88351 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.4■■□□□ 1.5
IkbkbO88351 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
IkbkbO88351 Gm7332-201ENSMUST00000118351 454 ntBASIC24.4■■□□□ 1.5
IkbkbO88351 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC24.39■■□□□ 1.5
IkbkbO88351 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
IkbkbO88351 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
IkbkbO88351 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
IkbkbO88351 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
IkbkbO88351 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
IkbkbO88351 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
IkbkbO88351 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC24.38■■□□□ 1.49
IkbkbO88351 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC24.38■■□□□ 1.49
IkbkbO88351 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
IkbkbO88351 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.37■■□□□ 1.49
IkbkbO88351 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
IkbkbO88351 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
IkbkbO88351 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
IkbkbO88351 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.37■■□□□ 1.49
IkbkbO88351 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
IkbkbO88351 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
IkbkbO88351 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
IkbkbO88351 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
IkbkbO88351 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
IkbkbO88351 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
IkbkbO88351 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
IkbkbO88351 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
IkbkbO88351 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.35■■□□□ 1.49
IkbkbO88351 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
IkbkbO88351 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
IkbkbO88351 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.34■■□□□ 1.49
IkbkbO88351 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
IkbkbO88351 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
IkbkbO88351 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
IkbkbO88351 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
IkbkbO88351 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
IkbkbO88351 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
IkbkbO88351 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
IkbkbO88351 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
IkbkbO88351 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
IkbkbO88351 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC24.32■■□□□ 1.48
IkbkbO88351 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
IkbkbO88351 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC24.32■■□□□ 1.48
IkbkbO88351 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
IkbkbO88351 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
IkbkbO88351 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
IkbkbO88351 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC24.31■■□□□ 1.48
IkbkbO88351 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
IkbkbO88351 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
IkbkbO88351 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC24.3■■□□□ 1.48
IkbkbO88351 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC24.3■■□□□ 1.48
IkbkbO88351 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
IkbkbO88351 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
IkbkbO88351 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
IkbkbO88351 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 9 ms