Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nr1i3O35627 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nr1i3O35627 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Nr1i3O35627 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nr1i3O35627 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Nr1i3O35627 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.82■■□□□ 1.4
Nr1i3O35627 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.82■■□□□ 1.4
Nr1i3O35627 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Nr1i3O35627 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nr1i3O35627 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Nr1i3O35627 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.81■■□□□ 1.4
Nr1i3O35627 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nr1i3O35627 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nr1i3O35627 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nr1i3O35627 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC23.81■■□□□ 1.4
Nr1i3O35627 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nr1i3O35627 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Nr1i3O35627 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nr1i3O35627 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.8■■□□□ 1.4
Nr1i3O35627 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Nr1i3O35627 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nr1i3O35627 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Nr1i3O35627 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nr1i3O35627 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nr1i3O35627 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Nr1i3O35627 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Nr1i3O35627 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC23.8■■□□□ 1.4
Nr1i3O35627 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nr1i3O35627 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nr1i3O35627 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
Nr1i3O35627 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.79■■□□□ 1.4
Nr1i3O35627 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nr1i3O35627 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Nr1i3O35627 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Nr1i3O35627 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nr1i3O35627 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nr1i3O35627 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nr1i3O35627 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nr1i3O35627 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nr1i3O35627 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Nr1i3O35627 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nr1i3O35627 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nr1i3O35627 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nr1i3O35627 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nr1i3O35627 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC23.77■■□□□ 1.4
Nr1i3O35627 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Nr1i3O35627 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nr1i3O35627 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nr1i3O35627 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nr1i3O35627 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nr1i3O35627 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Nr1i3O35627 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nr1i3O35627 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.75■■□□□ 1.39
Nr1i3O35627 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nr1i3O35627 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Nr1i3O35627 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nr1i3O35627 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Nr1i3O35627 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nr1i3O35627 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Nr1i3O35627 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Nr1i3O35627 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Nr1i3O35627 AC153524.1-201ENSMUST00000220436 1935 ntBASIC23.73■■□□□ 1.39
Nr1i3O35627 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Nr1i3O35627 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Nr1i3O35627 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nr1i3O35627 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nr1i3O35627 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nr1i3O35627 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Nr1i3O35627 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Nr1i3O35627 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nr1i3O35627 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nr1i3O35627 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.72■■□□□ 1.39
Nr1i3O35627 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Nr1i3O35627 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
Nr1i3O35627 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Nr1i3O35627 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nr1i3O35627 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nr1i3O35627 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Nr1i3O35627 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Nr1i3O35627 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nr1i3O35627 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nr1i3O35627 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nr1i3O35627 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nr1i3O35627 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Nr1i3O35627 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Nr1i3O35627 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nr1i3O35627 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nr1i3O35627 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.69■■□□□ 1.38
Nr1i3O35627 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
Nr1i3O35627 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
Nr1i3O35627 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Nr1i3O35627 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Nr1i3O35627 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Nr1i3O35627 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Nr1i3O35627 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
Nr1i3O35627 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Nr1i3O35627 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.66■■□□□ 1.38
Nr1i3O35627 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
Nr1i3O35627 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.65■■□□□ 1.38
Nr1i3O35627 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.65■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms