Protein–RNA interactions for Protein: J3QNH3

Gm21788, Predicted gene, 21788, mousemouse

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm21788J3QNH3 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.62■□□□□ 0.57
Gm21788J3QNH3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm21788J3QNH3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.62■□□□□ 0.57
Gm21788J3QNH3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
Gm21788J3QNH3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Gm21788J3QNH3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.61■□□□□ 0.57
Gm21788J3QNH3 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Gm21788J3QNH3 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Gm21788J3QNH3 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm21788J3QNH3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.6■□□□□ 0.57
Gm21788J3QNH3 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm21788J3QNH3 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Gm21788J3QNH3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm21788J3QNH3 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm21788J3QNH3 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm21788J3QNH3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Gm21788J3QNH3 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.6■□□□□ 0.57
Gm21788J3QNH3 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm21788J3QNH3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Gm21788J3QNH3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC18.59■□□□□ 0.57
Gm21788J3QNH3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm21788J3QNH3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm21788J3QNH3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Gm21788J3QNH3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm21788J3QNH3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm21788J3QNH3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Gm21788J3QNH3 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Gm21788J3QNH3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Gm21788J3QNH3 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Gm21788J3QNH3 Gm7199-201ENSMUST00000118327 1485 ntBASIC18.58■□□□□ 0.56
Gm21788J3QNH3 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm21788J3QNH3 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm21788J3QNH3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm21788J3QNH3 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm21788J3QNH3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Gm21788J3QNH3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Gm21788J3QNH3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Gm21788J3QNH3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm21788J3QNH3 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gm21788J3QNH3 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Gm21788J3QNH3 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Gm21788J3QNH3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.56■□□□□ 0.56
Gm21788J3QNH3 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Gm21788J3QNH3 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm21788J3QNH3 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Gm21788J3QNH3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm21788J3QNH3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm21788J3QNH3 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.55■□□□□ 0.56
Gm21788J3QNH3 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm21788J3QNH3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.55■□□□□ 0.56
Gm21788J3QNH3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Gm21788J3QNH3 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm21788J3QNH3 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Gm21788J3QNH3 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.54■□□□□ 0.56
Gm21788J3QNH3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21788J3QNH3 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21788J3QNH3 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21788J3QNH3 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21788J3QNH3 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21788J3QNH3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Gm21788J3QNH3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
Gm21788J3QNH3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm21788J3QNH3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm21788J3QNH3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.53■□□□□ 0.56
Gm21788J3QNH3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
Gm21788J3QNH3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Gm21788J3QNH3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm21788J3QNH3 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm21788J3QNH3 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Gm21788J3QNH3 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Gm21788J3QNH3 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Gm21788J3QNH3 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Gm21788J3QNH3 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Gm21788J3QNH3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.51■□□□□ 0.55
Gm21788J3QNH3 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Gm21788J3QNH3 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Gm21788J3QNH3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Gm21788J3QNH3 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21788J3QNH3 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21788J3QNH3 Gm9910-201ENSMUST00000195385 1550 ntBASIC18.5■□□□□ 0.55
Gm21788J3QNH3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Gm21788J3QNH3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Gm21788J3QNH3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21788J3QNH3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21788J3QNH3 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21788J3QNH3 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21788J3QNH3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21788J3QNH3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21788J3QNH3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21788J3QNH3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Gm21788J3QNH3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms