Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trav13d-3J3QMG8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trav13d-3J3QMG8 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trav13d-3J3QMG8 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav13d-3J3QMG8 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav13d-3J3QMG8 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trav13d-3J3QMG8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.45■□□□□ 0.7
Trav13d-3J3QMG8 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.45■□□□□ 0.7
Trav13d-3J3QMG8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Trav13d-3J3QMG8 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trav13d-3J3QMG8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav13d-3J3QMG8 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trav13d-3J3QMG8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav13d-3J3QMG8 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC19.44■□□□□ 0.7
Trav13d-3J3QMG8 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trav13d-3J3QMG8 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.44■□□□□ 0.7
Trav13d-3J3QMG8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.44■□□□□ 0.7
Trav13d-3J3QMG8 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav13d-3J3QMG8 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav13d-3J3QMG8 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trav13d-3J3QMG8 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trav13d-3J3QMG8 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trav13d-3J3QMG8 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav13d-3J3QMG8 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav13d-3J3QMG8 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav13d-3J3QMG8 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.41■□□□□ 0.7
Trav13d-3J3QMG8 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav13d-3J3QMG8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav13d-3J3QMG8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Trav13d-3J3QMG8 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav13d-3J3QMG8 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Trav13d-3J3QMG8 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav13d-3J3QMG8 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav13d-3J3QMG8 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav13d-3J3QMG8 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav13d-3J3QMG8 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav13d-3J3QMG8 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav13d-3J3QMG8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Trav13d-3J3QMG8 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav13d-3J3QMG8 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav13d-3J3QMG8 AC153524.1-201ENSMUST00000220436 1935 ntBASIC19.39■□□□□ 0.69
Trav13d-3J3QMG8 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav13d-3J3QMG8 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav13d-3J3QMG8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trav13d-3J3QMG8 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav13d-3J3QMG8 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav13d-3J3QMG8 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav13d-3J3QMG8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Trav13d-3J3QMG8 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav13d-3J3QMG8 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav13d-3J3QMG8 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav13d-3J3QMG8 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.36■□□□□ 0.69
Trav13d-3J3QMG8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.36■□□□□ 0.69
Trav13d-3J3QMG8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav13d-3J3QMG8 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav13d-3J3QMG8 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav13d-3J3QMG8 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav13d-3J3QMG8 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
Trav13d-3J3QMG8 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav13d-3J3QMG8 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trav13d-3J3QMG8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav13d-3J3QMG8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trav13d-3J3QMG8 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trav13d-3J3QMG8 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav13d-3J3QMG8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav13d-3J3QMG8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Trav13d-3J3QMG8 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav13d-3J3QMG8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trav13d-3J3QMG8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trav13d-3J3QMG8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Trav13d-3J3QMG8 Gm27502-201ENSMUST00000183495 199 ntBASIC19.33■□□□□ 0.68
Trav13d-3J3QMG8 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Trav13d-3J3QMG8 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Trav13d-3J3QMG8 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav13d-3J3QMG8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Trav13d-3J3QMG8 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav13d-3J3QMG8 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Trav13d-3J3QMG8 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav13d-3J3QMG8 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav13d-3J3QMG8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav13d-3J3QMG8 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Trav13d-3J3QMG8 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13d-3J3QMG8 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.3■□□□□ 0.68
Trav13d-3J3QMG8 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13d-3J3QMG8 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13d-3J3QMG8 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13d-3J3QMG8 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13d-3J3QMG8 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav13d-3J3QMG8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav13d-3J3QMG8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Trav13d-3J3QMG8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 71.5 ms