Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.22■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC16.2■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC16.18■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.17■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trdv2-1A0A0G2JGB9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.12■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Gm37847-201ENSMUST00000192163 1497 ntBASIC16.12■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Gm31748-201ENSMUST00000194938 1497 ntBASIC16.12■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.1■□□□□ 0.17
Trdv2-1A0A0G2JGB9 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv2-1A0A0G2JGB9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trdv2-1A0A0G2JGB9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trdv2-1A0A0G2JGB9 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms