Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trav19A0A0B4J1K4 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav19A0A0B4J1K4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav19A0A0B4J1K4 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav19A0A0B4J1K4 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Trav19A0A0B4J1K4 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav19A0A0B4J1K4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav19A0A0B4J1K4 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav19A0A0B4J1K4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav19A0A0B4J1K4 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav19A0A0B4J1K4 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav19A0A0B4J1K4 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav19A0A0B4J1K4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav19A0A0B4J1K4 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav19A0A0B4J1K4 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Trav19A0A0B4J1K4 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Trav19A0A0B4J1K4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav19A0A0B4J1K4 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav19A0A0B4J1K4 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav19A0A0B4J1K4 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav19A0A0B4J1K4 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav19A0A0B4J1K4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav19A0A0B4J1K4 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.46■□□□□ 0.23
Trav19A0A0B4J1K4 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav19A0A0B4J1K4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav19A0A0B4J1K4 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav19A0A0B4J1K4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav19A0A0B4J1K4 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav19A0A0B4J1K4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.45■□□□□ 0.22
Trav19A0A0B4J1K4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav19A0A0B4J1K4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav19A0A0B4J1K4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.45■□□□□ 0.22
Trav19A0A0B4J1K4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav19A0A0B4J1K4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav19A0A0B4J1K4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav19A0A0B4J1K4 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav19A0A0B4J1K4 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.44■□□□□ 0.22
Trav19A0A0B4J1K4 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.44■□□□□ 0.22
Trav19A0A0B4J1K4 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav19A0A0B4J1K4 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav19A0A0B4J1K4 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav19A0A0B4J1K4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.43■□□□□ 0.22
Trav19A0A0B4J1K4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav19A0A0B4J1K4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Gm13042-201ENSMUST00000119244 1955 ntBASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trav19A0A0B4J1K4 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav19A0A0B4J1K4 Gm26766-202ENSMUST00000227544 2347 ntBASIC16.41■□□□□ 0.22
Trav19A0A0B4J1K4 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav19A0A0B4J1K4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav19A0A0B4J1K4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav19A0A0B4J1K4 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav19A0A0B4J1K4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav19A0A0B4J1K4 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.41■□□□□ 0.22
Trav19A0A0B4J1K4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trav19A0A0B4J1K4 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav19A0A0B4J1K4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Trav19A0A0B4J1K4 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav19A0A0B4J1K4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trav19A0A0B4J1K4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav19A0A0B4J1K4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC16.39■□□□□ 0.22
Trav19A0A0B4J1K4 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.39■□□□□ 0.22
Trav19A0A0B4J1K4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav19A0A0B4J1K4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav19A0A0B4J1K4 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav19A0A0B4J1K4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Trav19A0A0B4J1K4 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Trav19A0A0B4J1K4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav19A0A0B4J1K4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav19A0A0B4J1K4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav19A0A0B4J1K4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav19A0A0B4J1K4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav19A0A0B4J1K4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav19A0A0B4J1K4 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav19A0A0B4J1K4 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC16.38■□□□□ 0.21
Trav19A0A0B4J1K4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav19A0A0B4J1K4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trav19A0A0B4J1K4 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms