Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv19A0A0B4J1H4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trbv19A0A0B4J1H4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv19A0A0B4J1H4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.71■□□□□ 0.43
Trbv19A0A0B4J1H4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Trbv19A0A0B4J1H4 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv19A0A0B4J1H4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv19A0A0B4J1H4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv19A0A0B4J1H4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.7■□□□□ 0.42
Trbv19A0A0B4J1H4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv19A0A0B4J1H4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv19A0A0B4J1H4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trbv19A0A0B4J1H4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv19A0A0B4J1H4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv19A0A0B4J1H4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.69■□□□□ 0.42
Trbv19A0A0B4J1H4 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv19A0A0B4J1H4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Trbv19A0A0B4J1H4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv19A0A0B4J1H4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv19A0A0B4J1H4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv19A0A0B4J1H4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv19A0A0B4J1H4 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv19A0A0B4J1H4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Trbv19A0A0B4J1H4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv19A0A0B4J1H4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Trbv19A0A0B4J1H4 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv19A0A0B4J1H4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv19A0A0B4J1H4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv19A0A0B4J1H4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv19A0A0B4J1H4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv19A0A0B4J1H4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv19A0A0B4J1H4 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv19A0A0B4J1H4 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trbv19A0A0B4J1H4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv19A0A0B4J1H4 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv19A0A0B4J1H4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.64■□□□□ 0.41
Trbv19A0A0B4J1H4 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.64■□□□□ 0.41
Trbv19A0A0B4J1H4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.64■□□□□ 0.41
Trbv19A0A0B4J1H4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.63■□□□□ 0.41
Trbv19A0A0B4J1H4 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv19A0A0B4J1H4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv19A0A0B4J1H4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trbv19A0A0B4J1H4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.62■□□□□ 0.41
Trbv19A0A0B4J1H4 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv19A0A0B4J1H4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv19A0A0B4J1H4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv19A0A0B4J1H4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trbv19A0A0B4J1H4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv19A0A0B4J1H4 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv19A0A0B4J1H4 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trbv19A0A0B4J1H4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.6■□□□□ 0.41
Trbv19A0A0B4J1H4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv19A0A0B4J1H4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv19A0A0B4J1H4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv19A0A0B4J1H4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms