Protein–RNA interactions for Protein: A0A0B4J1F6

BC053393, cDNA sequence BC053393, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC053393A0A0B4J1F6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BC053393A0A0B4J1F6 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC17.66■□□□□ 0.42
BC053393A0A0B4J1F6 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
BC053393A0A0B4J1F6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
BC053393A0A0B4J1F6 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BC053393A0A0B4J1F6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
BC053393A0A0B4J1F6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
BC053393A0A0B4J1F6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
BC053393A0A0B4J1F6 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
BC053393A0A0B4J1F6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
BC053393A0A0B4J1F6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
BC053393A0A0B4J1F6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BC053393A0A0B4J1F6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
BC053393A0A0B4J1F6 Gm8503-201ENSMUST00000118131 455 ntBASIC17.62■□□□□ 0.41
BC053393A0A0B4J1F6 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
BC053393A0A0B4J1F6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
BC053393A0A0B4J1F6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BC053393A0A0B4J1F6 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
BC053393A0A0B4J1F6 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.61■□□□□ 0.41
BC053393A0A0B4J1F6 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
BC053393A0A0B4J1F6 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
BC053393A0A0B4J1F6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
BC053393A0A0B4J1F6 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
BC053393A0A0B4J1F6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BC053393A0A0B4J1F6 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BC053393A0A0B4J1F6 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BC053393A0A0B4J1F6 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BC053393A0A0B4J1F6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC17.59■□□□□ 0.41
BC053393A0A0B4J1F6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
BC053393A0A0B4J1F6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BC053393A0A0B4J1F6 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.58■□□□□ 0.41
BC053393A0A0B4J1F6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BC053393A0A0B4J1F6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BC053393A0A0B4J1F6 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.58■□□□□ 0.4
BC053393A0A0B4J1F6 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BC053393A0A0B4J1F6 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BC053393A0A0B4J1F6 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC17.58■□□□□ 0.4
BC053393A0A0B4J1F6 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BC053393A0A0B4J1F6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BC053393A0A0B4J1F6 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BC053393A0A0B4J1F6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BC053393A0A0B4J1F6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
BC053393A0A0B4J1F6 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.56■□□□□ 0.4
BC053393A0A0B4J1F6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.56■□□□□ 0.4
BC053393A0A0B4J1F6 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
BC053393A0A0B4J1F6 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BC053393A0A0B4J1F6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BC053393A0A0B4J1F6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BC053393A0A0B4J1F6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BC053393A0A0B4J1F6 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BC053393A0A0B4J1F6 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BC053393A0A0B4J1F6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BC053393A0A0B4J1F6 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
BC053393A0A0B4J1F6 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Gm37136-201ENSMUST00000194368 194 ntBASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BC053393A0A0B4J1F6 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
BC053393A0A0B4J1F6 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
BC053393A0A0B4J1F6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
BC053393A0A0B4J1F6 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
BC053393A0A0B4J1F6 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.52■□□□□ 0.39
BC053393A0A0B4J1F6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BC053393A0A0B4J1F6 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.51■□□□□ 0.39
BC053393A0A0B4J1F6 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
BC053393A0A0B4J1F6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BC053393A0A0B4J1F6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BC053393A0A0B4J1F6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
BC053393A0A0B4J1F6 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
BC053393A0A0B4J1F6 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
BC053393A0A0B4J1F6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
BC053393A0A0B4J1F6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
BC053393A0A0B4J1F6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
BC053393A0A0B4J1F6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.49■□□□□ 0.39
BC053393A0A0B4J1F6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
BC053393A0A0B4J1F6 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
BC053393A0A0B4J1F6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
BC053393A0A0B4J1F6 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.49■□□□□ 0.39
BC053393A0A0B4J1F6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.49■□□□□ 0.39
BC053393A0A0B4J1F6 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
BC053393A0A0B4J1F6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms