Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-59A0A0A6YXE0 AC117769.4-201ENSMUST00000225679 685 ntBASIC15.6■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.6■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Ighv1-59A0A0A6YXE0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC15.58■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Gm27502-201ENSMUST00000183495 199 ntBASIC15.58■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-59A0A0A6YXE0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC15.57■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC15.57■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC15.57■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-59A0A0A6YXE0 AC151971.4-201ENSMUST00000214717 704 ntBASIC15.56■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-59A0A0A6YXE0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC15.56■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Gm14523-201ENSMUST00000117260 558 ntBASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-59A0A0A6YXE0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC15.53■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Gm7332-201ENSMUST00000118351 454 ntBASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Gm12366-201ENSMUST00000121722 873 ntBASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Gm5786-201ENSMUST00000085368 882 ntBASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ighv1-59A0A0A6YXE0 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-59A0A0A6YXE0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Ighv1-59A0A0A6YXE0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-59A0A0A6YXE0 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-59A0A0A6YXE0 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.51■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC15.5■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Ighv1-59A0A0A6YXE0 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms