Protein–RNA interactions for Protein: A0A075B6B5

Trav6-5, T cell receptor alpha variable 6-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-5A0A075B6B5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-5A0A075B6B5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Trav6-5A0A075B6B5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-5A0A075B6B5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-5A0A075B6B5 Gm9910-201ENSMUST00000195385 1550 ntBASIC17.18■□□□□ 0.34
Trav6-5A0A075B6B5 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-5A0A075B6B5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-5A0A075B6B5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav6-5A0A075B6B5 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trav6-5A0A075B6B5 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trav6-5A0A075B6B5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-5A0A075B6B5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.17■□□□□ 0.34
Trav6-5A0A075B6B5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.17■□□□□ 0.34
Trav6-5A0A075B6B5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav6-5A0A075B6B5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Trav6-5A0A075B6B5 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Trav6-5A0A075B6B5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-5A0A075B6B5 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav6-5A0A075B6B5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-5A0A075B6B5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav6-5A0A075B6B5 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trav6-5A0A075B6B5 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-5A0A075B6B5 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-5A0A075B6B5 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav6-5A0A075B6B5 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-5A0A075B6B5 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav6-5A0A075B6B5 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-5A0A075B6B5 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-5A0A075B6B5 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-5A0A075B6B5 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav6-5A0A075B6B5 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.13■□□□□ 0.33
Trav6-5A0A075B6B5 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trav6-5A0A075B6B5 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-5A0A075B6B5 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
Trav6-5A0A075B6B5 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-5A0A075B6B5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
Trav6-5A0A075B6B5 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav6-5A0A075B6B5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-5A0A075B6B5 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-5A0A075B6B5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav6-5A0A075B6B5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav6-5A0A075B6B5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav6-5A0A075B6B5 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-5A0A075B6B5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-5A0A075B6B5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav6-5A0A075B6B5 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-5A0A075B6B5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-5A0A075B6B5 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-5A0A075B6B5 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-5A0A075B6B5 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav6-5A0A075B6B5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav6-5A0A075B6B5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-5A0A075B6B5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav6-5A0A075B6B5 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-5A0A075B6B5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav6-5A0A075B6B5 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-5A0A075B6B5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-5A0A075B6B5 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav6-5A0A075B6B5 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-5A0A075B6B5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Trav6-5A0A075B6B5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-5A0A075B6B5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-5A0A075B6B5 Notumos-201ENSMUST00000151998 2659 ntBASIC17.07■□□□□ 0.32
Trav6-5A0A075B6B5 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav6-5A0A075B6B5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-5A0A075B6B5 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav6-5A0A075B6B5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-5A0A075B6B5 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-5A0A075B6B5 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-5A0A075B6B5 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
Trav6-5A0A075B6B5 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav6-5A0A075B6B5 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.06■□□□□ 0.32
Trav6-5A0A075B6B5 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav6-5A0A075B6B5 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Gm24970-201ENSMUST00000175582 82 ntBASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Trav6-5A0A075B6B5 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Trav6-5A0A075B6B5 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-5A0A075B6B5 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.03■□□□□ 0.32
Trav6-5A0A075B6B5 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-5A0A075B6B5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Trav6-5A0A075B6B5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms