Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-3A0A075B648 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav12-3A0A075B648 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-3A0A075B648 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-3A0A075B648 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-3A0A075B648 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trav12-3A0A075B648 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Trav12-3A0A075B648 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-3A0A075B648 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
Trav12-3A0A075B648 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-3A0A075B648 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trav12-3A0A075B648 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-3A0A075B648 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-3A0A075B648 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav12-3A0A075B648 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav12-3A0A075B648 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Trav12-3A0A075B648 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav12-3A0A075B648 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav12-3A0A075B648 Iqck-206ENSMUST00000208658 2891 ntBASIC16.2■□□□□ 0.18
Trav12-3A0A075B648 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-3A0A075B648 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-3A0A075B648 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav12-3A0A075B648 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-3A0A075B648 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-3A0A075B648 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Trav12-3A0A075B648 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-3A0A075B648 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-3A0A075B648 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-3A0A075B648 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
Trav12-3A0A075B648 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav12-3A0A075B648 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-3A0A075B648 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-3A0A075B648 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Trav12-3A0A075B648 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav12-3A0A075B648 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-3A0A075B648 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-3A0A075B648 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Trav12-3A0A075B648 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-3A0A075B648 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav12-3A0A075B648 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.17■□□□□ 0.18
Trav12-3A0A075B648 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav12-3A0A075B648 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12-3A0A075B648 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
Trav12-3A0A075B648 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
Trav12-3A0A075B648 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12-3A0A075B648 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12-3A0A075B648 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav12-3A0A075B648 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav12-3A0A075B648 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.15■□□□□ 0.18
Trav12-3A0A075B648 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12-3A0A075B648 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12-3A0A075B648 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12-3A0A075B648 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12-3A0A075B648 Peli2-204ENSMUST00000226513 1320 ntBASIC16.15■□□□□ 0.18
Trav12-3A0A075B648 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trav12-3A0A075B648 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12-3A0A075B648 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav12-3A0A075B648 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trav12-3A0A075B648 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Gm9910-201ENSMUST00000195385 1550 ntBASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trav12-3A0A075B648 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Trav12-3A0A075B648 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav12-3A0A075B648 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms