Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4n-4A0A075B615 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC15.42■□□□□ 0.06
Trav4n-4A0A075B615 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4n-4A0A075B615 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4n-4A0A075B615 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4n-4A0A075B615 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4n-4A0A075B615 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav4n-4A0A075B615 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4n-4A0A075B615 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4n-4A0A075B615 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4n-4A0A075B615 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4n-4A0A075B615 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4n-4A0A075B615 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav4n-4A0A075B615 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav4n-4A0A075B615 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4n-4A0A075B615 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4n-4A0A075B615 AC153524.1-201ENSMUST00000220436 1935 ntBASIC15.4■□□□□ 0.06
Trav4n-4A0A075B615 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4n-4A0A075B615 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4n-4A0A075B615 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav4n-4A0A075B615 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC15.39■□□□□ 0.05
Trav4n-4A0A075B615 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Trav4n-4A0A075B615 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav4n-4A0A075B615 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4n-4A0A075B615 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Trav4n-4A0A075B615 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4n-4A0A075B615 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4n-4A0A075B615 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4n-4A0A075B615 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4n-4A0A075B615 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav4n-4A0A075B615 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4n-4A0A075B615 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav4n-4A0A075B615 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
Trav4n-4A0A075B615 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4n-4A0A075B615 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4n-4A0A075B615 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4n-4A0A075B615 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav4n-4A0A075B615 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4n-4A0A075B615 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4n-4A0A075B615 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trav4n-4A0A075B615 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4n-4A0A075B615 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4n-4A0A075B615 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4n-4A0A075B615 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4n-4A0A075B615 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Trav4n-4A0A075B615 Hsf1-207ENSMUST00000228371 2102 ntBASIC15.35■□□□□ 0.05
Trav4n-4A0A075B615 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
Trav4n-4A0A075B615 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4n-4A0A075B615 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Trav4n-4A0A075B615 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC15.34■□□□□ 0.05
Trav4n-4A0A075B615 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4n-4A0A075B615 Gm37415-201ENSMUST00000192265 2054 ntBASIC15.34■□□□□ 0.05
Trav4n-4A0A075B615 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Trav4n-4A0A075B615 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Trav4n-4A0A075B615 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4n-4A0A075B615 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Trav4n-4A0A075B615 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Trav4n-4A0A075B615 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Trav4n-4A0A075B615 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4n-4A0A075B615 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4n-4A0A075B615 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4n-4A0A075B615 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4n-4A0A075B615 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4n-4A0A075B615 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4n-4A0A075B615 Gm9910-201ENSMUST00000195385 1550 ntBASIC15.32■□□□□ 0.04
Trav4n-4A0A075B615 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4n-4A0A075B615 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4n-4A0A075B615 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4n-4A0A075B615 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4n-4A0A075B615 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4n-4A0A075B615 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4n-4A0A075B615 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4n-4A0A075B615 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4n-4A0A075B615 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trav4n-4A0A075B615 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav4n-4A0A075B615 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trav4n-4A0A075B615 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4n-4A0A075B615 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4n-4A0A075B615 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav4n-4A0A075B615 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav4n-4A0A075B615 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.3■□□□□ 0.04
Trav4n-4A0A075B615 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4n-4A0A075B615 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.3■□□□□ 0.04
Trav4n-4A0A075B615 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4n-4A0A075B615 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4n-4A0A075B615 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4n-4A0A075B615 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4n-4A0A075B615 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4n-4A0A075B615 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4n-4A0A075B615 Gm26115-201ENSMUST00000175605 87 ntBASIC15.29■□□□□ 0.04
Trav4n-4A0A075B615 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4n-4A0A075B615 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4n-4A0A075B615 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4n-4A0A075B615 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4n-4A0A075B615 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4n-4A0A075B615 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
Trav4n-4A0A075B615 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4n-4A0A075B615 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4n-4A0A075B615 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4n-4A0A075B615 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms