Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trav6-6A0A075B603 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trav6-6A0A075B603 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Trav6-6A0A075B603 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-6A0A075B603 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trav6-6A0A075B603 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trav6-6A0A075B603 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.37■□□□□ 0.21
Trav6-6A0A075B603 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Gm42809-201ENSMUST00000198429 1138 ntBASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav6-6A0A075B603 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-6A0A075B603 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-6A0A075B603 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-6A0A075B603 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-6A0A075B603 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-6A0A075B603 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav6-6A0A075B603 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-6A0A075B603 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav6-6A0A075B603 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Trav6-6A0A075B603 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-6A0A075B603 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6-6A0A075B603 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trav6-6A0A075B603 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav6-6A0A075B603 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Trav6-6A0A075B603 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-6A0A075B603 Gm14121-201ENSMUST00000121441 1380 ntBASIC16.33■□□□□ 0.2
Trav6-6A0A075B603 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-6A0A075B603 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-6A0A075B603 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav6-6A0A075B603 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-6A0A075B603 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-6A0A075B603 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-6A0A075B603 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-6A0A075B603 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-6A0A075B603 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-6A0A075B603 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav6-6A0A075B603 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trav6-6A0A075B603 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-6A0A075B603 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-6A0A075B603 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.31■□□□□ 0.2
Trav6-6A0A075B603 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-6A0A075B603 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-6A0A075B603 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Trav6-6A0A075B603 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav6-6A0A075B603 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav6-6A0A075B603 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-6A0A075B603 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-6A0A075B603 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Trav6-6A0A075B603 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-6A0A075B603 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav6-6A0A075B603 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-6A0A075B603 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-6A0A075B603 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-6A0A075B603 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-6A0A075B603 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-6A0A075B603 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.28■□□□□ 0.2
Trav6-6A0A075B603 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trav6-6A0A075B603 Gm4419-202ENSMUST00000226239 1431 ntBASIC16.28■□□□□ 0.2
Trav6-6A0A075B603 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trav6-6A0A075B603 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms