Protein–RNA interactions for Protein: A0A075B5W6

Ighv1-55, Immunoglobulin heavy variable 1-55 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-55A0A075B5W6 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Ighv1-55A0A075B5W6 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.45■□□□□ 0.38
Ighv1-55A0A075B5W6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Ighv1-55A0A075B5W6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Ighv1-55A0A075B5W6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Ighv1-55A0A075B5W6 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-55A0A075B5W6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-55A0A075B5W6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-55A0A075B5W6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.44■□□□□ 0.38
Ighv1-55A0A075B5W6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Ighv1-55A0A075B5W6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-55A0A075B5W6 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ighv1-55A0A075B5W6 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-55A0A075B5W6 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-55A0A075B5W6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-55A0A075B5W6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ighv1-55A0A075B5W6 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ighv1-55A0A075B5W6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-55A0A075B5W6 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-55A0A075B5W6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Ighv1-55A0A075B5W6 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.41■□□□□ 0.38
Ighv1-55A0A075B5W6 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-55A0A075B5W6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Ighv1-55A0A075B5W6 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-55A0A075B5W6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ighv1-55A0A075B5W6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ighv1-55A0A075B5W6 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-55A0A075B5W6 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.4■□□□□ 0.38
Ighv1-55A0A075B5W6 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-55A0A075B5W6 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-55A0A075B5W6 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ighv1-55A0A075B5W6 Gm28731-201ENSMUST00000185564 1569 ntBASIC17.4■□□□□ 0.38
Ighv1-55A0A075B5W6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-55A0A075B5W6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.39■□□□□ 0.38
Ighv1-55A0A075B5W6 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-55A0A075B5W6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ighv1-55A0A075B5W6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-55A0A075B5W6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-55A0A075B5W6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-55A0A075B5W6 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.39■□□□□ 0.37
Ighv1-55A0A075B5W6 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-55A0A075B5W6 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-55A0A075B5W6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ighv1-55A0A075B5W6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ighv1-55A0A075B5W6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-55A0A075B5W6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-55A0A075B5W6 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.38■□□□□ 0.37
Ighv1-55A0A075B5W6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-55A0A075B5W6 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Ighv1-55A0A075B5W6 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 AC153524.1-201ENSMUST00000220436 1935 ntBASIC17.37■□□□□ 0.37
Ighv1-55A0A075B5W6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-55A0A075B5W6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-55A0A075B5W6 Mir6538-201ENSMUST00000183713 110 ntBASIC17.36■□□□□ 0.37
Ighv1-55A0A075B5W6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-55A0A075B5W6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Ighv1-55A0A075B5W6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ighv1-55A0A075B5W6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-55A0A075B5W6 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ighv1-55A0A075B5W6 Gm27502-201ENSMUST00000183495 199 ntBASIC17.35■□□□□ 0.37
Ighv1-55A0A075B5W6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ighv1-55A0A075B5W6 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ighv1-55A0A075B5W6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.34■□□□□ 0.37
Ighv1-55A0A075B5W6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Ighv1-55A0A075B5W6 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-55A0A075B5W6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ighv1-55A0A075B5W6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.33■□□□□ 0.36
Ighv1-55A0A075B5W6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-55A0A075B5W6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC17.33■□□□□ 0.36
Ighv1-55A0A075B5W6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-55A0A075B5W6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ighv1-55A0A075B5W6 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-55A0A075B5W6 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-55A0A075B5W6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ighv1-55A0A075B5W6 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-55A0A075B5W6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-55A0A075B5W6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-55A0A075B5W6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.32■□□□□ 0.36
Ighv1-55A0A075B5W6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ighv1-55A0A075B5W6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ighv1-55A0A075B5W6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ighv1-55A0A075B5W6 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms