Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Grk6-207ENSMUST00000225925 2769 ntBASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hmgn3Q9DCB1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Gm25016-201ENSMUST00000158399 131 ntBASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hmgn3Q9DCB1 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Gm17808-201ENSMUST00000200859 894 ntBASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Gm45328-201ENSMUST00000210942 917 ntBASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hmgn3Q9DCB1 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Hmgn3Q9DCB1 Gm13312-201ENSMUST00000119631 718 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms