Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.87■□□□□ 0.61
ALPK3Q96L96 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
ALPK3Q96L96 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC18.87■□□□□ 0.61
ALPK3Q96L96 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
ALPK3Q96L96 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.87■□□□□ 0.61
ALPK3Q96L96 AC093677.2-201ENST00000600169 1863 ntBASIC18.87■□□□□ 0.61
ALPK3Q96L96 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.87■□□□□ 0.61
ALPK3Q96L96 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.87■□□□□ 0.61
ALPK3Q96L96 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
ALPK3Q96L96 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 AL161645.1-201ENST00000622716 1255 ntBASIC18.86■□□□□ 0.61
ALPK3Q96L96 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 WASH6P-202ENST00000359512 1437 ntBASIC18.86■□□□□ 0.61
ALPK3Q96L96 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 KRT8P23-201ENST00000560090 1207 ntBASIC18.86■□□□□ 0.61
ALPK3Q96L96 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.86■□□□□ 0.61
ALPK3Q96L96 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
ALPK3Q96L96 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 AC027369.6-201ENST00000525520 931 ntBASIC18.85■□□□□ 0.61
ALPK3Q96L96 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 MIR6799-201ENST00000620297 69 ntBASIC18.85■□□□□ 0.61
ALPK3Q96L96 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.85■□□□□ 0.61
ALPK3Q96L96 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ALPK3Q96L96 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 DUTP2-201ENST00000519164 463 ntBASIC18.84■□□□□ 0.61
ALPK3Q96L96 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ALPK3Q96L96 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ALPK3Q96L96 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms