Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhb17Q91VD8 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Tceal9-202ENSMUST00000113115 888 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Gm6973-201ENSMUST00000117080 721 ntBASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Gm43575-201ENSMUST00000196420 516 ntBASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhb17Q91VD8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm23935-201ENSMUST00000102303 57 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm24270-201ENSMUST00000102326 57 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm12656-201ENSMUST00000118149 577 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm15483-201ENSMUST00000120338 456 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm11745-201ENSMUST00000121669 448 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 1700023C21Rik-201ENSMUST00000143247 389 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm24245-201ENSMUST00000157318 57 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm37809-201ENSMUST00000195050 931 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm44353-201ENSMUST00000200618 138 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 AC154245.1-201ENSMUST00000224615 601 ntBASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhb17Q91VD8 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms