Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.11□□□□□ -0.15
SynpoQ8CC35 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.11□□□□□ -0.15
SynpoQ8CC35 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.11□□□□□ -0.15
SynpoQ8CC35 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SynpoQ8CC35 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.1□□□□□ -0.15
SynpoQ8CC35 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SynpoQ8CC35 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.09□□□□□ -0.15
SynpoQ8CC35 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.09□□□□□ -0.15
SynpoQ8CC35 Rprl2-201ENSMUST00000157150 290 ntBASIC14.09□□□□□ -0.15
SynpoQ8CC35 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Gm44872-201ENSMUST00000207864 420 ntBASIC14.09□□□□□ -0.15
SynpoQ8CC35 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.09□□□□□ -0.15
SynpoQ8CC35 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SynpoQ8CC35 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.08□□□□□ -0.15
SynpoQ8CC35 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
SynpoQ8CC35 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.15
SynpoQ8CC35 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SynpoQ8CC35 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SynpoQ8CC35 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.15
SynpoQ8CC35 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
SynpoQ8CC35 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms