Protein–RNA interactions for Protein: Q00420

Gabpb1, GA-binding protein subunit beta-1, mousemouse

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabpb1Q00420 Gm5479-201ENSMUST00000160578 435 ntBASIC14.8□□□□□ -0.04
Gabpb1Q00420 Rpph1-201ENSMUST00000175096 319 ntBASIC14.8□□□□□ -0.04
Gabpb1Q00420 Mir3113-201ENSMUST00000175478 76 ntBASIC14.8□□□□□ -0.04
Gabpb1Q00420 Gm27525-201ENSMUST00000184465 107 ntBASIC14.8□□□□□ -0.04
Gabpb1Q00420 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Gabpb1Q00420 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Gabpb1Q00420 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.79□□□□□ -0.04
Gabpb1Q00420 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.79□□□□□ -0.04
Gabpb1Q00420 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.79□□□□□ -0.04
Gabpb1Q00420 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.79□□□□□ -0.04
Gabpb1Q00420 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Gabpb1Q00420 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.78□□□□□ -0.04
Gabpb1Q00420 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.78□□□□□ -0.04
Gabpb1Q00420 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Gabpb1Q00420 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.77□□□□□ -0.04
Gabpb1Q00420 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms