Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATN1P54259 SPDYE11-202ENST00000450699 704 ntBASIC19.23■□□□□ 0.67
ATN1P54259 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
ATN1P54259 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATN1P54259 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.23■□□□□ 0.67
ATN1P54259 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATN1P54259 SPDYE9P-201ENST00000570642 692 ntBASIC19.23■□□□□ 0.67
ATN1P54259 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.23■□□□□ 0.67
ATN1P54259 SPDYE10P-202ENST00000612005 668 ntBASIC19.23■□□□□ 0.67
ATN1P54259 ACTL9-202ENST00000612068 1252 ntBASIC19.23■□□□□ 0.67
ATN1P54259 SPDYE8P-202ENST00000612377 668 ntBASIC19.23■□□□□ 0.67
ATN1P54259 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATN1P54259 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATN1P54259 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATN1P54259 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATN1P54259 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.23■□□□□ 0.67
ATN1P54259 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATN1P54259 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.23■□□□□ 0.67
ATN1P54259 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATN1P54259 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.22■□□□□ 0.67
ATN1P54259 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC19.22■□□□□ 0.67
ATN1P54259 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 AC002056.1-201ENST00000395613 760 ntBASIC19.22■□□□□ 0.67
ATN1P54259 TFAMP1-201ENST00000412727 736 ntBASIC19.22■□□□□ 0.67
ATN1P54259 AL355306.1-201ENST00000415580 579 ntBASIC19.22■□□□□ 0.67
ATN1P54259 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.22■□□□□ 0.67
ATN1P54259 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
ATN1P54259 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.22■□□□□ 0.67
ATN1P54259 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 AL592309.1-201ENST00000443127 649 ntBASIC19.22■□□□□ 0.67
ATN1P54259 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
ATN1P54259 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.22■□□□□ 0.67
ATN1P54259 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.22■□□□□ 0.67
ATN1P54259 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC19.22■□□□□ 0.67
ATN1P54259 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC19.22■□□□□ 0.67
ATN1P54259 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
ATN1P54259 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ATN1P54259 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 TUBB3P1-201ENST00000405796 1332 ntBASIC19.22■□□□□ 0.67
ATN1P54259 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATN1P54259 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
ATN1P54259 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC19.21■□□□□ 0.67
ATN1P54259 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.21■□□□□ 0.67
ATN1P54259 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.21■□□□□ 0.67
ATN1P54259 AC051619.7-201ENST00000568314 623 ntBASIC19.21■□□□□ 0.67
ATN1P54259 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC19.21■□□□□ 0.67
ATN1P54259 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC19.21■□□□□ 0.67
ATN1P54259 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.21■□□□□ 0.67
ATN1P54259 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ATN1P54259 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATN1P54259 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATN1P54259 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATN1P54259 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATN1P54259 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATN1P54259 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATN1P54259 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ATN1P54259 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
ATN1P54259 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATN1P54259 AC007274.1-201ENST00000439805 662 ntBASIC19.2■□□□□ 0.66
ATN1P54259 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.2■□□□□ 0.66
ATN1P54259 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
ATN1P54259 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATN1P54259 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATN1P54259 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.2■□□□□ 0.66
ATN1P54259 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
ATN1P54259 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATN1P54259 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.2■□□□□ 0.66
ATN1P54259 AL590787.1-201ENST00000568856 1315 ntBASIC19.2■□□□□ 0.66
ATN1P54259 AC116562.4-201ENST00000641316 2276 ntBASIC19.2■□□□□ 0.66
ATN1P54259 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATN1P54259 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms