Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cdh4P39038 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh4P39038 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh4P39038 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
Cdh4P39038 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh4P39038 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh4P39038 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh4P39038 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh4P39038 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.96□□□□□ -0.18
Cdh4P39038 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh4P39038 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cdh4P39038 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cdh4P39038 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdh4P39038 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cdh4P39038 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdh4P39038 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdh4P39038 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.95□□□□□ -0.18
Cdh4P39038 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdh4P39038 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.95□□□□□ -0.18
Cdh4P39038 Gm9726-201ENSMUST00000180321 678 ntBASIC13.95□□□□□ -0.18
Cdh4P39038 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.95□□□□□ -0.18
Cdh4P39038 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.95□□□□□ -0.18
Cdh4P39038 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdh4P39038 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.95□□□□□ -0.18
Cdh4P39038 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cdh4P39038 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.95□□□□□ -0.18
Cdh4P39038 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Cdh4P39038 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cdh4P39038 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.94□□□□□ -0.18
Cdh4P39038 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cdh4P39038 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Gm2810-201ENSMUST00000118681 990 ntBASIC13.94□□□□□ -0.18
Cdh4P39038 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Gm43125-201ENSMUST00000201724 730 ntBASIC13.94□□□□□ -0.18
Cdh4P39038 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.94□□□□□ -0.18
Cdh4P39038 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdh4P39038 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cdh4P39038 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cdh4P39038 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.94□□□□□ -0.18
Cdh4P39038 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Cdh4P39038 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cdh4P39038 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.93□□□□□ -0.18
Cdh4P39038 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cdh4P39038 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Cdh4P39038 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cdh4P39038 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.93□□□□□ -0.18
Cdh4P39038 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Cdh4P39038 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.93□□□□□ -0.18
Cdh4P39038 Gm5479-201ENSMUST00000160578 435 ntBASIC13.93□□□□□ -0.18
Cdh4P39038 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.93□□□□□ -0.18
Cdh4P39038 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.93□□□□□ -0.18
Cdh4P39038 Gm38225-201ENSMUST00000194001 393 ntBASIC13.93□□□□□ -0.18
Cdh4P39038 Gm2451-201ENSMUST00000199447 999 ntBASIC13.93□□□□□ -0.18
Cdh4P39038 Gm10290-201ENSMUST00000200451 999 ntBASIC13.93□□□□□ -0.18
Cdh4P39038 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.93□□□□□ -0.18
Cdh4P39038 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
Cdh4P39038 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Cdh4P39038 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms