Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TIMP1P01033 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMP1P01033 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.78■□□□□ 0.6
TIMP1P01033 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.78■□□□□ 0.6
TIMP1P01033 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMP1P01033 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TIMP1P01033 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.78■□□□□ 0.6
TIMP1P01033 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 GOLGA6L11P-201ENST00000417252 1298 ntBASIC18.78■□□□□ 0.6
TIMP1P01033 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.78■□□□□ 0.6
TIMP1P01033 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.78■□□□□ 0.6
TIMP1P01033 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMP1P01033 AC007274.1-201ENST00000439805 662 ntBASIC18.78■□□□□ 0.6
TIMP1P01033 SPDYE14P-201ENST00000442619 822 ntBASIC18.78■□□□□ 0.6
TIMP1P01033 CRB3P1-201ENST00000449338 276 ntBASIC18.78■□□□□ 0.6
TIMP1P01033 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMP1P01033 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMP1P01033 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMP1P01033 CR383656.12-201ENST00000549567 513 ntBASIC18.78■□□□□ 0.6
TIMP1P01033 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.78■□□□□ 0.6
TIMP1P01033 AL358472.5-202ENST00000641448 1267 ntBASIC18.78■□□□□ 0.6
TIMP1P01033 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
TIMP1P01033 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TIMP1P01033 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMP1P01033 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.78■□□□□ 0.6
TIMP1P01033 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TIMP1P01033 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.78■□□□□ 0.6
TIMP1P01033 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.77■□□□□ 0.6
TIMP1P01033 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TIMP1P01033 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TIMP1P01033 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
TIMP1P01033 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
TIMP1P01033 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.77■□□□□ 0.6
TIMP1P01033 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.77■□□□□ 0.6
TIMP1P01033 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.77■□□□□ 0.6
TIMP1P01033 AC097493.3-201ENST00000509725 367 ntBASIC18.77■□□□□ 0.6
TIMP1P01033 AC107918.2-201ENST00000530817 355 ntBASIC18.77■□□□□ 0.6
TIMP1P01033 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMP1P01033 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.77■□□□□ 0.6
TIMP1P01033 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.77■□□□□ 0.6
TIMP1P01033 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.77■□□□□ 0.6
TIMP1P01033 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.77■□□□□ 0.6
TIMP1P01033 AC027307.3-201ENST00000594262 1100 ntBASIC18.77■□□□□ 0.6
TIMP1P01033 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TIMP1P01033 AC084121.4-201ENST00000641598 221 ntBASIC18.77■□□□□ 0.6
TIMP1P01033 AF228730.8-201ENST00000642140 221 ntBASIC18.77■□□□□ 0.6
TIMP1P01033 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
TIMP1P01033 UXT-AS1-201ENST00000590504 1525 ntBASIC18.77■□□□□ 0.6
TIMP1P01033 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.77■□□□□ 0.6
TIMP1P01033 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TIMP1P01033 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TIMP1P01033 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TIMP1P01033 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.77■□□□□ 0.59
TIMP1P01033 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.77■□□□□ 0.59
TIMP1P01033 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TIMP1P01033 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 AC093677.2-201ENST00000600169 1863 ntBASIC18.76■□□□□ 0.59
TIMP1P01033 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMP1P01033 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMP1P01033 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMP1P01033 AC069120.2-201ENST00000524091 540 ntBASIC18.76■□□□□ 0.59
TIMP1P01033 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.76■□□□□ 0.59
TIMP1P01033 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
TIMP1P01033 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.76■□□□□ 0.59
TIMP1P01033 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
TIMP1P01033 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TIMP1P01033 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.76■□□□□ 0.59
TIMP1P01033 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMP1P01033 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.75■□□□□ 0.59
TIMP1P01033 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMP1P01033 AC046185.3-201ENST00000623228 1824 ntBASIC18.75■□□□□ 0.59
TIMP1P01033 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMP1P01033 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TIMP1P01033 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMP1P01033 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms