Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC28A2O43868 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC28A2O43868 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A2O43868 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A2O43868 GPX1P2-201ENST00000429271 606 ntBASIC16.93■□□□□ 0.3
SLC28A2O43868 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A2O43868 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A2O43868 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A2O43868 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC28A2O43868 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC28A2O43868 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC28A2O43868 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A2O43868 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A2O43868 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC28A2O43868 AC124864.1-201ENST00000623408 392 ntBASIC16.93■□□□□ 0.3
SLC28A2O43868 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
SLC28A2O43868 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
SLC28A2O43868 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC28A2O43868 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 AC012317.2-201ENST00000623305 2251 ntBASIC16.93■□□□□ 0.3
SLC28A2O43868 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SLC28A2O43868 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC28A2O43868 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC28A2O43868 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC28A2O43868 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SLC28A2O43868 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.92■□□□□ 0.3
SLC28A2O43868 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SLC28A2O43868 MED15P5-201ENST00000423150 992 ntBASIC16.92■□□□□ 0.3
SLC28A2O43868 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC28A2O43868 AC027601.4-201ENST00000611259 610 ntBASIC16.92■□□□□ 0.3
SLC28A2O43868 AL592071.1-201ENST00000611956 408 ntBASIC16.92■□□□□ 0.3
SLC28A2O43868 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC28A2O43868 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC28A2O43868 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SLC28A2O43868 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC28A2O43868 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A2O43868 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC28A2O43868 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SLC28A2O43868 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC28A2O43868 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC28A2O43868 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC28A2O43868 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
SLC28A2O43868 SCARNA2-201ENST00000458748 420 ntBASIC16.91■□□□□ 0.3
SLC28A2O43868 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A2O43868 GUSBP12-201ENST00000513727 720 ntBASIC16.91■□□□□ 0.3
SLC28A2O43868 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC28A2O43868 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC28A2O43868 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC28A2O43868 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC28A2O43868 AL356488.2-201ENST00000602755 427 ntBASIC16.91■□□□□ 0.3
SLC28A2O43868 AC008608.2-201ENST00000606089 416 ntBASIC16.91■□□□□ 0.3
SLC28A2O43868 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC28A2O43868 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms