Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cldn3Q9Z0G9 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Gm11543-201ENSMUST00000120758 370 ntBASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Gm20553-201ENSMUST00000204205 844 ntBASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cldn3Q9Z0G9 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn3Q9Z0G9 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn3Q9Z0G9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn3Q9Z0G9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn3Q9Z0G9 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.77□□□□□ -0.04
Cldn3Q9Z0G9 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn3Q9Z0G9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cldn3Q9Z0G9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Cldn3Q9Z0G9 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.04
Cldn3Q9Z0G9 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Cldn3Q9Z0G9 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Gm6973-201ENSMUST00000117080 721 ntBASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cldn3Q9Z0G9 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms