Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 AC097637.2-201ENST00000624096 1997 ntBASIC18.16■□□□□ 0.5
RNF38Q9H0F5 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RNF38Q9H0F5 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 MED15P5-201ENST00000423150 992 ntBASIC18.15■□□□□ 0.5
RNF38Q9H0F5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 GPALPP1-207ENST00000611650 899 ntBASIC18.15■□□□□ 0.5
RNF38Q9H0F5 PGM5P2-202ENST00000637225 1043 ntBASIC18.15■□□□□ 0.5
RNF38Q9H0F5 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 AC020763.4-201ENST00000623414 4170 ntBASIC18.15■□□□□ 0.5
RNF38Q9H0F5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RNF38Q9H0F5 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RNF38Q9H0F5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.14■□□□□ 0.5
RNF38Q9H0F5 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 AC007967.2-201ENST00000432613 625 ntBASIC18.14■□□□□ 0.49
RNF38Q9H0F5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 AL591424.1-201ENST00000442569 1213 ntBASIC18.14■□□□□ 0.49
RNF38Q9H0F5 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 KRT18P3-201ENST00000451602 1288 ntBASIC18.14■□□□□ 0.49
RNF38Q9H0F5 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 AC012317.2-201ENST00000623305 2251 ntBASIC18.14■□□□□ 0.49
RNF38Q9H0F5 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RNF38Q9H0F5 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 NEFHP1-201ENST00000412845 2629 ntBASIC18.13■□□□□ 0.49
RNF38Q9H0F5 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 MYCLP1-201ENST00000372451 1075 ntBASIC18.13■□□□□ 0.49
RNF38Q9H0F5 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RNF38Q9H0F5 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms