Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Ddx41Q91VN6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 AC131187.1-201ENSMUST00000224567 809 ntBASIC16.77■□□□□ 0.28
Ddx41Q91VN6 AC131710.1-201ENSMUST00000228336 990 ntBASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ddx41Q91VN6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx41Q91VN6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx41Q91VN6 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx41Q91VN6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC16.77■□□□□ 0.27
Ddx41Q91VN6 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx41Q91VN6 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx41Q91VN6 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ddx41Q91VN6 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Gm37691-201ENSMUST00000192147 2573 ntBASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Gm25287-201ENSMUST00000103846 110 ntBASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Gm22918-201ENSMUST00000103855 110 ntBASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.76■□□□□ 0.27
Ddx41Q91VN6 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ddx41Q91VN6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ddx41Q91VN6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ddx41Q91VN6 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ddx41Q91VN6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms