Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 MINOS1P3-201ENST00000457048 203 ntBASIC18.42■□□□□ 0.54
RNF43Q68DV7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 AC011467.2-201ENST00000598425 242 ntBASIC18.42■□□□□ 0.54
RNF43Q68DV7 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 REXO1L6P-202ENST00000619970 1078 ntBASIC18.42■□□□□ 0.54
RNF43Q68DV7 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RNF43Q68DV7 IL9RP2-201ENST00000423948 1312 ntBASIC18.42■□□□□ 0.54
RNF43Q68DV7 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.42■□□□□ 0.54
RNF43Q68DV7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 AC092183.1-201ENST00000469884 875 ntBASIC18.41■□□□□ 0.54
RNF43Q68DV7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 AC097374.2-201ENST00000618617 1306 ntBASIC18.41■□□□□ 0.54
RNF43Q68DV7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
RNF43Q68DV7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RNF43Q68DV7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 TP73-AS1-210ENST00000637775 1455 ntBASIC18.4■□□□□ 0.54
RNF43Q68DV7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 FAM220CP-201ENST00000395253 831 ntBASIC18.4■□□□□ 0.54
RNF43Q68DV7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 SAPCD2P3-201ENST00000455031 850 ntBASIC18.4■□□□□ 0.54
RNF43Q68DV7 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 AC009533.2-201ENST00000543664 586 ntBASIC18.4■□□□□ 0.54
RNF43Q68DV7 MIR5100-201ENST00000579544 119 ntBASIC18.4■□□□□ 0.54
RNF43Q68DV7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF43Q68DV7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF43Q68DV7 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms