Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm13464-201ENSMUST00000119418 935 ntBASIC14.36□□□□□ -0.11
VclQ64727 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
VclQ64727 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.36□□□□□ -0.11
VclQ64727 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
VclQ64727 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
VclQ64727 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.36□□□□□ -0.11
VclQ64727 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC14.36□□□□□ -0.11
VclQ64727 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VclQ64727 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
VclQ64727 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.36□□□□□ -0.11
VclQ64727 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
VclQ64727 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.35□□□□□ -0.11
VclQ64727 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VclQ64727 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.35□□□□□ -0.11
VclQ64727 Gm24158-201ENSMUST00000175263 71 ntBASIC14.35□□□□□ -0.11
VclQ64727 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.35□□□□□ -0.11
VclQ64727 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.35□□□□□ -0.11
VclQ64727 Gm43474-201ENSMUST00000196415 774 ntBASIC14.35□□□□□ -0.11
VclQ64727 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.35□□□□□ -0.11
VclQ64727 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
VclQ64727 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
VclQ64727 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
VclQ64727 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VclQ64727 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.35□□□□□ -0.11
VclQ64727 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
VclQ64727 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.35□□□□□ -0.11
VclQ64727 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
VclQ64727 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VclQ64727 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
VclQ64727 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
VclQ64727 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
VclQ64727 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.34□□□□□ -0.11
VclQ64727 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.34□□□□□ -0.11
VclQ64727 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.34□□□□□ -0.11
VclQ64727 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC14.34□□□□□ -0.11
VclQ64727 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.34□□□□□ -0.11
VclQ64727 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Gm9182-201ENSMUST00000217829 639 ntBASIC14.34□□□□□ -0.11
VclQ64727 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.34□□□□□ -0.11
VclQ64727 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.34□□□□□ -0.11
VclQ64727 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.34□□□□□ -0.11
VclQ64727 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.34□□□□□ -0.11
VclQ64727 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
VclQ64727 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
VclQ64727 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms