Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 HLA-V-201ENST00000429037 534 ntBASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 INGX-202ENST00000489074 768 ntBASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 LINC00304-203ENST00000565008 1864 ntBASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 CXCL1P1-201ENST00000502804 216 ntBASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 AF228730.6-201ENST00000641497 218 ntBASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 AC084121.3-201ENST00000641716 218 ntBASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 AC105233.6-201ENST00000642093 218 ntBASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 POR-209ENST00000439269 1858 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
VPS13DQ5THJ4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 AC002056.1-201ENST00000395613 760 ntBASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 AC067863.1-201ENST00000494933 530 ntBASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 HNRNPRP1-201ENST00000453465 1695 ntBASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
VPS13DQ5THJ4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13DQ5THJ4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13DQ5THJ4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13DQ5THJ4 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13DQ5THJ4 TREML5P-201ENST00000421694 576 ntBASIC11.65□□□□□ -0.54
VPS13DQ5THJ4 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC11.65□□□□□ -0.54
VPS13DQ5THJ4 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC11.65□□□□□ -0.54
VPS13DQ5THJ4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13DQ5THJ4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
VPS13DQ5THJ4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms