Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm3P62311 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Lsm3P62311 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.33□□□□□ -0.27
Lsm3P62311 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.33□□□□□ -0.27
Lsm3P62311 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
Lsm3P62311 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Lsm3P62311 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm3P62311 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.33□□□□□ -0.28
Lsm3P62311 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm3P62311 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.33□□□□□ -0.28
Lsm3P62311 Gm18101-201ENSMUST00000215769 548 ntBASIC13.33□□□□□ -0.28
Lsm3P62311 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm3P62311 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.33□□□□□ -0.28
Lsm3P62311 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Lsm3P62311 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Lsm3P62311 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC13.33□□□□□ -0.28
Lsm3P62311 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Lsm3P62311 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Lsm3P62311 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Lsm3P62311 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm3P62311 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.32□□□□□ -0.28
Lsm3P62311 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.32□□□□□ -0.28
Lsm3P62311 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Gm10313-201ENSMUST00000095320 1002 ntBASIC13.32□□□□□ -0.28
Lsm3P62311 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.32□□□□□ -0.28
Lsm3P62311 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
Lsm3P62311 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Lsm3P62311 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Lsm3P62311 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Lsm3P62311 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm3P62311 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm3P62311 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm3P62311 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.31□□□□□ -0.28
Lsm3P62311 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm3P62311 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.31□□□□□ -0.28
Lsm3P62311 Gm19164-201ENSMUST00000210667 640 ntBASIC13.31□□□□□ -0.28
Lsm3P62311 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.31□□□□□ -0.28
Lsm3P62311 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.31□□□□□ -0.28
Lsm3P62311 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm3P62311 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Lsm3P62311 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Lsm3P62311 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms