Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Sdc2P43407 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Sdc2P43407 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Gm8749-201ENSMUST00000117737 331 ntBASIC16.39■□□□□ 0.21
Sdc2P43407 Gm13464-201ENSMUST00000119418 935 ntBASIC16.39■□□□□ 0.21
Sdc2P43407 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Sdc2P43407 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Sdc2P43407 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Sdc2P43407 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sdc2P43407 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Sdc2P43407 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.38■□□□□ 0.21
Sdc2P43407 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.38■□□□□ 0.21
Sdc2P43407 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Sdc2P43407 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Sdc2P43407 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Mir5126-201ENSMUST00000175513 77 ntBASIC16.38■□□□□ 0.21
Sdc2P43407 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.38■□□□□ 0.21
Sdc2P43407 Gm18195-201ENSMUST00000207604 706 ntBASIC16.38■□□□□ 0.21
Sdc2P43407 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.38■□□□□ 0.21
Sdc2P43407 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC16.38■□□□□ 0.21
Sdc2P43407 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC16.38■□□□□ 0.21
Sdc2P43407 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
Sdc2P43407 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.38■□□□□ 0.21
Sdc2P43407 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC16.38■□□□□ 0.21
Sdc2P43407 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Sdc2P43407 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Sdc2P43407 Gm8096-201ENSMUST00000209921 1591 ntBASIC16.38■□□□□ 0.21
Sdc2P43407 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.38■□□□□ 0.21
Sdc2P43407 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Sdc2P43407 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.37■□□□□ 0.21
Sdc2P43407 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Sdc2P43407 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC16.37■□□□□ 0.21
Sdc2P43407 AC164629.2-201ENSMUST00000217916 270 ntBASIC16.37■□□□□ 0.21
Sdc2P43407 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.37■□□□□ 0.21
Sdc2P43407 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
Sdc2P43407 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Sdc2P43407 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC16.37■□□□□ 0.21
Sdc2P43407 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Tcf21-202ENSMUST00000218002 1788 ntBASIC16.36■□□□□ 0.21
Sdc2P43407 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.36■□□□□ 0.21
Sdc2P43407 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Sdc2P43407 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms