Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 AL139327.4-201ENST00000612362 153 ntBASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 AL023803.3-201ENST00000615559 522 ntBASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 AC092053.1-201ENST00000605787 1936 ntBASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TRDV1A0A1B0GX56 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 KRT18P65-201ENST00000439811 1286 ntBASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 KLF13-207ENST00000560473 489 ntTSL 3 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 AL596257.1-201ENST00000641463 2694 ntBASIC15.46■□□□□ 0.07
TRDV1A0A1B0GX56 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.46■□□□□ 0.06
TRDV1A0A1B0GX56 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
TRDV1A0A1B0GX56 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRDV1A0A1B0GX56 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRDV1A0A1B0GX56 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRDV1A0A1B0GX56 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRDV1A0A1B0GX56 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
TRDV1A0A1B0GX56 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
TRDV1A0A1B0GX56 AC093525.9-201ENST00000624961 1746 ntBASIC15.46■□□□□ 0.06
TRDV1A0A1B0GX56 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 CRYGFP-201ENST00000418459 633 ntBASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 TSPY17P-201ENST00000450329 467 ntBASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 AC113404.2-201ENST00000507884 177 ntBASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 AL353719.1-201ENST00000566847 864 ntBASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
TRDV1A0A1B0GX56 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms