Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Gm7901-201ENSMUST00000120430 1597 ntBASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trav7n-4A0A075B620 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Gm13436-201ENSMUST00000120418 567 ntBASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Arhgef33-211ENSMUST00000225658 473 ntBASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 AC112142.1-201ENSMUST00000228796 918 ntBASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 AC157650.3-201ENSMUST00000225058 1476 ntBASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Trav7n-4A0A075B620 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Mir770-201ENSMUST00000103252 94 ntBASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Gm45058-201ENSMUST00000205810 766 ntBASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Gm10812-201ENSMUST00000099864 546 ntBASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Trav7n-4A0A075B620 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms