Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim33Q99PP7 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.53□□□□□ -0.08
Trim33Q99PP7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 AC073947.1-201ENSMUST00000216991 649 ntBASIC14.53□□□□□ -0.08
Trim33Q99PP7 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC14.53□□□□□ -0.08
Trim33Q99PP7 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim33Q99PP7 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.52□□□□□ -0.08
Trim33Q99PP7 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim33Q99PP7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Gm4995-201ENSMUST00000117247 432 ntBASIC14.52□□□□□ -0.09
Trim33Q99PP7 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.52□□□□□ -0.09
Trim33Q99PP7 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Trim33Q99PP7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim33Q99PP7 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Gm17271-201ENSMUST00000165535 355 ntBASIC14.51□□□□□ -0.09
Trim33Q99PP7 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.51□□□□□ -0.09
Trim33Q99PP7 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms