Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC107Q8WV48 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC107Q8WV48 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC107Q8WV48 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC107Q8WV48 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC107Q8WV48 KRT8P9-201ENST00000558927 1449 ntBASIC15.26■□□□□ 0.03
CCDC107Q8WV48 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 PHB2-202ENST00000440277 996 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 MIR4497-201ENST00000583208 89 ntBASIC15.25■□□□□ 0.03
CCDC107Q8WV48 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 CYP2D8P-201ENST00000433633 1490 ntBASIC15.25■□□□□ 0.03
CCDC107Q8WV48 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 KRT8P7-201ENST00000533003 1432 ntBASIC15.25■□□□□ 0.03
CCDC107Q8WV48 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC107Q8WV48 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 PCDHB19P-201ENST00000570871 2371 ntBASIC15.24■□□□□ 0.03
CCDC107Q8WV48 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC107Q8WV48 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 TSPY14P-201ENST00000303979 915 ntBASIC15.23■□□□□ 0.03
CCDC107Q8WV48 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.23■□□□□ 0.03
CCDC107Q8WV48 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 GXYLT1P6-201ENST00000456472 1187 ntBASIC15.23■□□□□ 0.03
CCDC107Q8WV48 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 AC128688.1-201ENST00000487626 519 ntBASIC15.23■□□□□ 0.03
CCDC107Q8WV48 EGLN1P1-201ENST00000531623 762 ntBASIC15.23■□□□□ 0.03
CCDC107Q8WV48 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 NAPSB-206ENST00000562112 1266 ntBASIC15.23■□□□□ 0.03
CCDC107Q8WV48 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.23■□□□□ 0.03
CCDC107Q8WV48 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms