Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab11fip3Q8CHD8 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab11fip3Q8CHD8 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab11fip3Q8CHD8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab11fip3Q8CHD8 Gm13034-201ENSMUST00000121342 3177 ntBASIC18.89■□□□□ 0.62
Rab11fip3Q8CHD8 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab11fip3Q8CHD8 Gm9252-201ENSMUST00000172364 1602 ntBASIC18.89■□□□□ 0.62
Rab11fip3Q8CHD8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Rab11fip3Q8CHD8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 CT025535.1-201ENSMUST00000227172 491 ntBASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Gm10584-201ENSMUST00000207036 2628 ntBASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rab11fip3Q8CHD8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Gm5866-201ENSMUST00000177881 973 ntBASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Gm46209-201ENSMUST00000217912 553 ntBASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 AC132863.2-201ENSMUST00000226643 799 ntBASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rab11fip3Q8CHD8 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Gm13127-201ENSMUST00000118978 1389 ntBASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Gm14042-201ENSMUST00000120139 833 ntBASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Gm9867-201ENSMUST00000192212 2647 ntBASIC18.87■□□□□ 0.61
Rab11fip3Q8CHD8 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 AC154412.1-201ENSMUST00000226540 2786 ntBASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Gm4204-201ENSMUST00000110798 1231 ntBASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Gm9229-201ENSMUST00000222777 126 ntBASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Rab11fip3Q8CHD8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms