Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Prpf40bQ80W14 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Gm12859-201ENSMUST00000117834 427 ntBASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Gm28630-201ENSMUST00000187806 498 ntBASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Gm28631-201ENSMUST00000190740 334 ntBASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Gm29541-201ENSMUST00000191351 678 ntBASIC16.88■□□□□ 0.29
Prpf40bQ80W14 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Prpf40bQ80W14 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Gm6745-201ENSMUST00000199216 526 ntBASIC16.87■□□□□ 0.29
Prpf40bQ80W14 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 AC154239.3-201ENSMUST00000226933 674 ntBASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Prpf40bQ80W14 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Gm8318-201ENSMUST00000182954 872 ntBASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.86■□□□□ 0.29
Prpf40bQ80W14 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Prpf40bQ80W14 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Prpf40bQ80W14 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms