Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 DUX4L26-201ENST00000489078 1255 ntBASIC16.28■□□□□ 0.2
TUBA1AQ71U36 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TUBA1AQ71U36 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 GCSHP2-201ENST00000560971 527 ntBASIC16.27■□□□□ 0.2
TUBA1AQ71U36 AL049597.2-201ENST00000565575 961 ntBASIC16.27■□□□□ 0.2
TUBA1AQ71U36 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TUBA1AQ71U36 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.27■□□□□ 0.19
TUBA1AQ71U36 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1AQ71U36 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1AQ71U36 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1AQ71U36 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
TUBA1AQ71U36 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1AQ71U36 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1AQ71U36 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1AQ71U36 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TUBA1AQ71U36 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 GMCL1P1-201ENST00000463439 1581 ntBASIC16.26■□□□□ 0.19
TUBA1AQ71U36 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 MIR1224-201ENST00000408193 85 ntBASIC16.26■□□□□ 0.19
TUBA1AQ71U36 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 AC112497.1-201ENST00000624824 639 ntBASIC16.26■□□□□ 0.19
TUBA1AQ71U36 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TUBA1AQ71U36 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBA1AQ71U36 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TUBA1AQ71U36 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBA1AQ71U36 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TUBA1AQ71U36 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBA1AQ71U36 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBA1AQ71U36 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.25■□□□□ 0.19
TUBA1AQ71U36 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TUBA1AQ71U36 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms