Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Rnf44Q3UHJ8 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Gm2810-201ENSMUST00000118681 990 ntBASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Gm9726-201ENSMUST00000180321 678 ntBASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Rnf44Q3UHJ8 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Gm5479-201ENSMUST00000160578 435 ntBASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Mir6990-201ENSMUST00000183724 91 ntBASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Olfr286-202ENSMUST00000205305 969 ntBASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Rnf44Q3UHJ8 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Gm44335-201ENSMUST00000196879 141 ntBASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Gm44297-201ENSMUST00000198304 141 ntBASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Gm44346-201ENSMUST00000198851 141 ntBASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Rnf44Q3UHJ8 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms