Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC16.21■□□□□ 0.19
Atp9aO70228 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.21■□□□□ 0.19
Atp9aO70228 Gm24543-201ENSMUST00000103867 82 ntBASIC16.21■□□□□ 0.19
Atp9aO70228 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Atp9aO70228 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.21■□□□□ 0.19
Atp9aO70228 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC16.21■□□□□ 0.19
Atp9aO70228 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.21■□□□□ 0.19
Atp9aO70228 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Atp9aO70228 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atp9aO70228 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Atp9aO70228 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp9aO70228 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Atp9aO70228 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.2■□□□□ 0.18
Atp9aO70228 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Gm9182-201ENSMUST00000217829 639 ntBASIC16.2■□□□□ 0.18
Atp9aO70228 AC090659.2-201ENSMUST00000225378 1186 ntBASIC16.2■□□□□ 0.18
Atp9aO70228 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.2■□□□□ 0.18
Atp9aO70228 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Gm13034-201ENSMUST00000121342 3177 ntBASIC16.2■□□□□ 0.18
Atp9aO70228 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Atp9aO70228 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.19■□□□□ 0.18
Atp9aO70228 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Atp9aO70228 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.19■□□□□ 0.18
Atp9aO70228 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Atp9aO70228 Gm12428-201ENSMUST00000119844 727 ntBASIC16.19■□□□□ 0.18
Atp9aO70228 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Atp9aO70228 Gm27631-201ENSMUST00000184163 466 ntBASIC16.19■□□□□ 0.18
Atp9aO70228 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.19■□□□□ 0.18
Atp9aO70228 Gm7775-201ENSMUST00000218871 853 ntBASIC16.19■□□□□ 0.18
Atp9aO70228 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Atp9aO70228 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.19■□□□□ 0.18
Atp9aO70228 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Atp9aO70228 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.19■□□□□ 0.18
Atp9aO70228 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC16.19■□□□□ 0.18
Atp9aO70228 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.19■□□□□ 0.18
Atp9aO70228 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Carlr-201ENSMUST00000181515 2574 ntBASIC16.19■□□□□ 0.18
Atp9aO70228 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Atp9aO70228 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp9aO70228 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp9aO70228 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp9aO70228 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Atp9aO70228 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.18■□□□□ 0.18
Atp9aO70228 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atp9aO70228 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp9aO70228 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp9aO70228 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp9aO70228 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Atp9aO70228 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Atp9aO70228 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Atp9aO70228 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms