Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Hps1O08983 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Hps1O08983 Gm14140-201ENSMUST00000119999 995 ntBASIC13.62□□□□□ -0.23
Hps1O08983 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Hps1O08983 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Gm25745-201ENSMUST00000174945 133 ntBASIC13.62□□□□□ -0.23
Hps1O08983 Gm6089-201ENSMUST00000197666 938 ntBASIC13.62□□□□□ -0.23
Hps1O08983 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.62□□□□□ -0.23
Hps1O08983 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.62□□□□□ -0.23
Hps1O08983 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Gm9172-201ENSMUST00000212092 954 ntBASIC13.62□□□□□ -0.23
Hps1O08983 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Hps1O08983 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Hps1O08983 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Hps1O08983 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Gm11960-202ENSMUST00000181063 2858 ntBASIC13.61□□□□□ -0.23
Hps1O08983 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.61□□□□□ -0.23
Hps1O08983 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Hps1O08983 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Hps1O08983 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.61□□□□□ -0.23
Hps1O08983 Gm14494-201ENSMUST00000118786 435 ntBASIC13.61□□□□□ -0.23
Hps1O08983 Gm13418-201ENSMUST00000119097 944 ntBASIC13.61□□□□□ -0.23
Hps1O08983 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Gm26308-201ENSMUST00000157768 69 ntBASIC13.61□□□□□ -0.23
Hps1O08983 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
Hps1O08983 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC13.61□□□□□ -0.23
Hps1O08983 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.61□□□□□ -0.23
Hps1O08983 AV026068-213ENSMUST00000223675 1171 ntBASIC13.61□□□□□ -0.23
Hps1O08983 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.61□□□□□ -0.23
Hps1O08983 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Hps1O08983 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Hps1O08983 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.61□□□□□ -0.23
Hps1O08983 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.61□□□□□ -0.23
Hps1O08983 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Hps1O08983 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.6□□□□□ -0.23
Hps1O08983 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hps1O08983 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.6□□□□□ -0.23
Hps1O08983 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Hps1O08983 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hps1O08983 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.6□□□□□ -0.23
Hps1O08983 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hps1O08983 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.6□□□□□ -0.23
Hps1O08983 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Hps1O08983 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.6□□□□□ -0.23
Hps1O08983 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Hps1O08983 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms