Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.04■□□□□ -0
Atf6F6VAN0 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Gm43697-201ENSMUST00000199637 2581 ntBASIC15.04■□□□□ -0
Atf6F6VAN0 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.04■□□□□ -0
Atf6F6VAN0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Atf6F6VAN0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Atf6F6VAN0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.03■□□□□ -0
Atf6F6VAN0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Gm9385-201ENSMUST00000117563 472 ntBASIC15.03■□□□□ -0
Atf6F6VAN0 Gm23547-201ENSMUST00000158210 271 ntBASIC15.03■□□□□ -0
Atf6F6VAN0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC15.03■□□□□ -0
Atf6F6VAN0 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.03■□□□□ -0
Atf6F6VAN0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Atf6F6VAN0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Atf6F6VAN0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.03■□□□□ -0
Atf6F6VAN0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Atf6F6VAN0 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.03■□□□□ -0
Atf6F6VAN0 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Atf6F6VAN0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Atf6F6VAN0 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.02■□□□□ -0
Atf6F6VAN0 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.02■□□□□ -0
Atf6F6VAN0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6F6VAN0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6F6VAN0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6F6VAN0 Gm8749-201ENSMUST00000117737 331 ntBASIC15.02■□□□□ -0
Atf6F6VAN0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.02■□□□□ -0
Atf6F6VAN0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
Atf6F6VAN0 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.02■□□□□ -0
Atf6F6VAN0 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6F6VAN0 Gm44771-201ENSMUST00000206975 626 ntBASIC15.02■□□□□ -0
Atf6F6VAN0 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC15.02■□□□□ -0
Atf6F6VAN0 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6F6VAN0 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Atf6F6VAN0 AC090659.1-201ENSMUST00000224334 768 ntBASIC15.02■□□□□ -0
Atf6F6VAN0 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Atf6F6VAN0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.02□□□□□ -0.01
Atf6F6VAN0 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Gm4691-201ENSMUST00000182339 1000 ntBASIC15.01□□□□□ -0.01
Atf6F6VAN0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.01□□□□□ -0.01
Atf6F6VAN0 Gm44492-201ENSMUST00000197012 141 ntBASIC15.01□□□□□ -0.01
Atf6F6VAN0 Gm2451-201ENSMUST00000199447 999 ntBASIC15.01□□□□□ -0.01
Atf6F6VAN0 Gm10290-201ENSMUST00000200451 999 ntBASIC15.01□□□□□ -0.01
Atf6F6VAN0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Atf6F6VAN0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms