Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Cpsf4lE9Q2N0 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Gm9856-201ENSMUST00000217077 2578 ntBASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Gm23547-201ENSMUST00000158210 271 ntBASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Gm37935-201ENSMUST00000192012 982 ntBASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC12.39□□□□□ -0.43
Cpsf4lE9Q2N0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Gm37230-201ENSMUST00000194491 818 ntBASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Gm2756-201ENSMUST00000195851 400 ntBASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Gm9182-201ENSMUST00000217829 639 ntBASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Cpsf4lE9Q2N0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Gm2810-201ENSMUST00000118681 990 ntBASIC12.37□□□□□ -0.43
Cpsf4lE9Q2N0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms