Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nkx2-4Q9EQM3 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Gm11661-201ENSMUST00000121761 1327 ntBASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Gm45784-201ENSMUST00000188360 142 ntBASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Gm5279-201ENSMUST00000199575 745 ntBASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nkx2-4Q9EQM3 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx2-4Q9EQM3 Gm42853-201ENSMUST00000201273 1387 ntBASIC14.96□□□□□ -0.02
Nkx2-4Q9EQM3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Nkx2-4Q9EQM3 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
Nkx2-4Q9EQM3 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Snora78-201ENSMUST00000158630 128 ntBASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Gm27486-201ENSMUST00000184923 80 ntBASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Nkx2-4Q9EQM3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 BC001981-202ENSMUST00000191393 1545 ntBASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
Nkx2-4Q9EQM3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms