Protein–RNA interactions for Protein: Q9D032

Ssbp3, Single-stranded DNA-binding protein 3, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp3Q9D032 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Ssbp3Q9D032 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Gm37171-201ENSMUST00000192636 1185 ntBASIC12.22□□□□□ -0.45
Ssbp3Q9D032 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Gm43474-201ENSMUST00000196415 774 ntBASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Ssbp3Q9D032 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Ssbp3Q9D032 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssbp3Q9D032 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Ssbp3Q9D032 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms