Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Gm12467-201ENSMUST00000117625 745 ntBASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Gm8749-201ENSMUST00000117737 331 ntBASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Gm13464-201ENSMUST00000119418 935 ntBASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Gm26871-204ENSMUST00000181310 523 ntTSL 3 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retreg3Q9CQV4 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Gm36982-201ENSMUST00000193796 1128 ntBASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 AC159114.1-201ENSMUST00000220349 266 ntBASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 AC131187.1-201ENSMUST00000224567 809 ntBASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 CT030684.1-201ENSMUST00000227292 914 ntBASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retreg3Q9CQV4 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Gm44387-201ENSMUST00000196298 145 ntBASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Gm44863-201ENSMUST00000207613 1422 ntBASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retreg3Q9CQV4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms